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Approximate Matching & Counting
Locality Sensitive Hashing (LSH)

Architecture & Hardware
 

Automata, Transducers, and Tries
 

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Data Structures
 

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Java Software for Linear Algebra
 

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Efficient Computing at Carnegie Mellon  
Embeddable data storage engines   - Tracking, Benchmarking and Sharing Information about an open source embedded data storage engines, internals, architectures, data storage and transaction processing.
Google Optimization Tools   - software suite for combinatorial optimization
KDnuggets   - A comprehensive resource on data mining
Liquid   - The Language-Integrated Quantum Operations simulator
Lockless MPI  
OneRNG   - an entropy source / hardware random number generator (HWRNG), connected via USB to your computer.
PRIM   - a Java primitives library akin to GNU Trove. It differs by focusing heavily on sparse representations of vectors and matrices.